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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015931677.1_cds_XP_016478426.1_70067
CDS Infomation

[gene=LOC107799791] [db_xref=GeneID:107799791] [protein=probable Xaa-Pro aminopeptidase 3] [protein_id=XP_016478426.1] [location=join(1198..1257,1682..1756,1955..2218,2407..2499,3983..4189,5205..5308,5575..5641,5754..5861,6355..6447,7188..7278,7481..7551,9407..9462,10130..10190,10326..10427)] [gbkey=CDS]
Sequence

ATGCAGTTTTTCCGAAGAAACCCATCACTTCACAGAATCTCCTCCAGATTCCTTAATCAA
GTAGTCAAAACCAGTGCATATTCAACCAAGAAAGTTTACAATGCTGGGCAGCCGACTGCT
GCTACTCACCCTCAGTTAATGAAGGAAGGGGAGATTACTCCTGGCATTACCAGTGAAGAA
TATATGCAGAGAAGGAAGAAATTATTGGAGTTTCTTCCGGAGAATAGCTTAGCAATTGTT
GCAGCCGCTCCCATAAAAATGATGACTGATGTTGTACCATACAATTTTAGGCAGGATGCT
GACTATTTGTACATCACCGGATGCCAACAACCTGGTGGTGTTGCAGTTCTAGGGCATGAC
TGTGGTTTATGCATGTTCATGCCAGAACAAAGCCCCCAGGACGCTCTTTGGCAAGGAGAA
ACTGCTGGAGTTGATGCAGCTCTACAGATATTCAAGGCTGACCTTGCTTACCCTATTAAC
AGATTGCCTCAGATTCTCTCCAGGATGATAGAAAGTTCTTCCACTGTGTTCCATAATGTG
AAGACAAGGACTTCATCCTACCTGGAGCTTGAGGCCTATAAAAAAGCAGTTAGCAATTAC
AAAGTGAAAGATTTCTCTGTGTACACTCATGAAGCCCGATTTGTGAAGTCTCCAGCAGAG
CTGAAATTGATGAGAGATTCTGCATCTATAGCTTGTCAGGCACTTGTCCAGACCATGTTG
TACTCGAAGTTGTTTCCTGATGAAGGAATGCTGTCAGCCAAATTTGAATATGAATGCAGA
GTTAGAGGTGCCCAAAGAATGGCGTTTAATCCTGTTGTTGGTGGCGGACCTAATGGCAGT
GTCGTGCATTATTTTCGTAATGACCAGAAAATTGAAGATGGTAACCTTGTCCTCATGGAT
GTTGGATGCGAGCTCCACGGTTATGTCAGTGATCTTACTCGTGTTTGGCCGCCCTTTGGA
AAATTTTCTTCTGTTCAAGAGGAACTTTATAATCTTATTTTGGAGACAAACAAGGAATGC
GTGGAGCTGTGCAGACCTGGCACAACCATCCGAGAAATACACCACTACTCGGTAGAAACG
CTGCGAAGAGGATTCAAAGAAATTGGGATACTAAAAAATGATCGGCGTGGAAGATATGAA
ATGTTAAATCCTACAAATATAGGTCACTATCTAGGAATGGACGTTCATGATTGTTCTACA
ATTGGAAATGATCGACCTCTGAAACCTGGTGTAGTCATCACAATTGAACCAGGAGTATAC
ATCCCTTCATGCTTTGATTGTCCAGAAAGGTTCCAAGGCATTGGATTTAGGATTGAAGAT
GAAGTCCTTATTACAGAATCAGGTTATGAGGTACTTACTGCATCCATACCGAAGGAAATT
AAACACCTCGAGTCCTTGTTGAACAACTTTGGCAGTGGGAGAGGAACAGAAATTAGAGCT
GCTCTCAGTTAG

Peptide Sequence

PEP ID

XP_016478426.1
PEP Infomation

PREDICTED: probable Xaa-Pro aminopeptidase 3 [Nicotiana tabacum]
Sequence

MQFFRRNPSLHRISSRFLNQVVKTSAYSTKKVYNAGQPTAATHPQLMKEGEITPGITSEE
YMQRRKKLLEFLPENSLAIVAAAPIKMMTDVVPYNFRQDADYLYITGCQQPGGVAVLGHD
CGLCMFMPEQSPQDALWQGETAGVDAALQIFKADLAYPINRLPQILSRMIESSSTVFHNV
KTRTSSYLELEAYKKAVSNYKVKDFSVYTHEARFVKSPAELKLMRDSASIACQALVQTML
YSKLFPDEGMLSAKFEYECRVRGAQRMAFNPVVGGGPNGSVVHYFRNDQKIEDGNLVLMD
VGCELHGYVSDLTRVWPPFGKFSSVQEELYNLILETNKECVELCRPGTTIREIHHYSVET
LRRGFKEIGILKNDRRGRYEMLNPTNIGHYLGMDVHDCSTIGNDRPLKPGVVITIEPGVY
IPSCFDCPERFQGIGFRIEDEVLITESGYEVLTASIPKEIKHLESLLNNFGSGRGTEIRA
ALS

Transcript Sequence

Gene sequence data has not been registered.